BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025G08LP1|AL428440
(878 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1655 1687 0.0
>3x_Contig1655
Length = 16228
Score = 1687 bits (849), Expect = 0.0
Identities = 868/875 (99%), Gaps = 1/875 (0%)
Strand = Plus / Plus
Query: 1 atctcacaagcgcaaatctttcaatgaggacaagccgtggaagtctcatgtggatattgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10566 atctcacaagcgcaaatctttcaatgaggacaagccgtggaagtctcatgtggatattgg 10625
Query: 61 atacatcagtgaaagagaacggaaaagatacgagggaatttgggtcaccaacagaaacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10626 atacatcagtgaaagagaacggaaaagatacgagggaatttgggtcaccaacagaaacag 10685
Query: 121 ttatttggaacttctaccatggtggaatcagccgctacaggatgaagagcaagaacagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10686 ttatttggaacttctaccatggtggaatcagccgctacaggatgaagagcaagaacagga 10745
Query: 181 acaggaacgagaaatggatcatgaatcacaacatggactagaagaagaattagaagaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10746 acaggaacgagaaatggatcatgaatcacaacatggactagaagaagaattagaagaaga 10805
Query: 241 acgggaacaagaatcgggacaaggccaagaacaggatgcagatattccggaagatggatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10806 acgggaacaagaatcgggacaaggccaagaacaggatgcagatattccggaagatggatt 10865
Query: 301 gatgttgaaccttattgtaatggaaatttggtccagaagtaacctttcgaatcagttgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10866 gatgttgaaccttattgtaatggaaatttggtccagaagtaacctttcgaatcagttgct 10925
Query: 361 aggtcaaatttatgataaagtggatacgagacacgatggtaccttgaaccgacaatcttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10926 aggtcaaatttatgataaagtggatacgagacacgatggtaccttgaaccgacaatcttt 10985
Query: 421 tctcacgggaatgtggttagtggatcaatgtctctatggacgaaagcttccgaaacaaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10986 tctcacgggaatgtggttagtggatcaatgtctctatggacgaaagcttccgaaacaaat 11045
Query: 481 agatcaacgggtctgggacagtgtcgacaagtttgtcatcagtattccgaacaataatcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11046 agatcaacgggtctgggacagtgtcgacaagtttgtcatcagtattccgaacaataatcc 11105
Query: 541 gcatcatcgtcacagaagaaggaagaaaatgcttaggaaagaattgaaaaccattaagaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11106 gcatcatcgtcacagaagaaggaagaaaatgcttaggaaagaattgaaaaccattaagaa 11165
Query: 601 ggaccttaaaacttgagcatcatcgataaatactcggacgaagyatcacagctagatata 660
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 11166 ggaccttaaaacttgagcatcatcgataaatactcggacgaagtcatacagctagatata 11225
Query: 661 tagagacatactttagcattgcagtgtgccggcaatgtacaaatatcgggctctatgtct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11226 tagagacatactttagcattgcagtgtgccggcaatgtacaaatatcgggctctatgtct 11285
Query: 721 ctcttttcttgcacgtgattwgcacaagaaagcaggaggtactaaaaaaaggctcaaatt 780
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 11286 ctcttttcttgcacgtgattagcacaagaaagcaggaggtactaaaaaaaggctcaaatt 11345
Query: 781 agatccattcacaagaaccgtctcatcaatgatctgagatttaagagaagaaattaacct 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11346 agatccattcacaagaaccgtctcatcaatgatctgagatttaagagaagaaattaacct 11405
Query: 841 gccaa-gaaaggaccaccatctgctagaagtyagt 874
||||| ||||||||||||||||||||||||| |||
Sbjct: 11406 gccaaggaaaggaccaccatctgctagaagtcagt 11440
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6998
Number of Sequences: 1807
Number of extensions: 6998
Number of successful extensions: 69
Number of sequences better than 1.0e-20: 1
length of query: 878
length of database: 10,358,551
effective HSP length: 16
effective length of query: 862
effective length of database: 10,329,639
effective search space: 8904148818
effective search space used: 8904148818
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)